Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548p in GCT Seminoma Korkola Cluster 109 Table contains all genes in the GCT Seminoma Korkola cluster number 109. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548p 10180 RBM6 RNA binding motif protein 6 [Source:HGNC Symbol;Acc:9903] zzz999 4216 MAP3K4 mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:6856] zzz999 51710 ZNF44 zinc finger protein 44 [Source:HGNC Symbol;Acc:13110] zzz999 64745 METTL17 methyltransferase like 17 [Source:HGNC Symbol;Acc:19280] zzz999 9112 MTA1 metastasis associated 1 [Source:HGNC Symbol;Acc:7410] zzz999 57680 CHD8 chromodomain helicase DNA binding protein 8 [Source:HGNC Symbol;Acc:20153] zzz999 9527 GOSR1 golgi SNAP receptor complex member 1 [Source:HGNC Symbol;Acc:4430] P T 2932 GSK3B glycogen synthase kinase 3 beta [Source:HGNC Symbol;Acc:4617] zzz999 26330 GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:HGNC Symbol;Acc:24864] zzz999 3035 HARS histidyl-tRNA synthetase [Source:HGNC Symbol;Acc:4816] zzz999 9512 PMPCB peptidase (mitochondrial processing) beta [Source:HGNC Symbol;Acc:9119] zzz999 6817 SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 [Source:HGNC Symbol;Acc:11453] zzz999 23309 SIN3B SIN3 homolog B, transcription regulator (yeast) [Source:HGNC Symbol;Acc:19354] zzz999 5586 PKN2 protein kinase N2 [Source:HGNC Symbol;Acc:9406] P T 26276 VPS33B vacuolar protein sorting 33 homolog B (yeast) [Source:HGNC Symbol;Acc:12712] T 55832 CAND1 cullin-associated and neddylation-dissociated 1 [Source:HGNC Symbol;Acc:30688] zzz999 3842 TNPO1 transportin 1 [Source:HGNC Symbol;Acc:6401] P T 8349 HIST2H2BE histone cluster 2, H2be [Source:HGNC Symbol;Acc:4760] T 65981 CAPRIN2 caprin family member 2 [Source:HGNC Symbol;Acc:21259] zzz999 6635 SNRPE small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] zzz999 5747 PTK2 PTK2 protein tyrosine kinase 2 [Source:HGNC Symbol;Acc:9611] zzz999 55697 VAC14 Vac14 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25507] zzz999 6433 SFSWAP splicing factor, suppressor of white-apricot homolog (Drosophila) [Source:HGNC Symbol;Acc:10790] zzz999 55239 OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:HGNC Symbol;Acc:25585] zzz999 440 ASNS asparagine synthetase (glutamine-hydrolyzing) [Source:HGNC Symbol;Acc:753] zzz999 7644 ZNF91 zinc finger protein 91 [Source:HGNC Symbol;Acc:13166] zzz999 9295 SRSF11 serine/arginine-rich splicing factor 11 [Source:HGNC Symbol;Acc:10782] zzz999 23648 SSBP3 single stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:15674] zzz999 80279 CDK5RAP3 CDK5 regulatory subunit associated protein 3 [Source:HGNC Symbol;Acc:18673] zzz999 10497 UNC13B unc-13 homolog B (C. elegans) [Source:HGNC Symbol;Acc:12566] T 54876 DCAF16 DDB1 and CUL4 associated factor 16 [Source:HGNC Symbol;Acc:25987] P T 58155 PTBP2 polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:17662] P T 65108 MARCKSL1 MARCKS-like 1 [Source:HGNC Symbol;Acc:7142] zzz999 6687 SPG7 spastic paraplegia 7 (pure and complicated autosomal recessive) [Source:HGNC Symbol;Acc:11237] zzz999 3607 FOXK2 forkhead box K2 [Source:HGNC Symbol;Acc:6036] zzz999 55023 PHIP pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:15673] zzz999 10498 CARM1 coactivator-associated arginine methyltransferase 1 [Source:HGNC Symbol;Acc:23393] T 23512 SUZ12 suppressor of zeste 12 homolog (Drosophila) [Source:HGNC Symbol;Acc:17101] P T 51351 ZNF117 zinc finger protein 117 [Source:HGNC Symbol;Acc:12897] zzz999 8481 OFD1 oral-facial-digital syndrome 1 [Source:HGNC Symbol;Acc:2567] zzz999 9883 POM121 POM121 membrane glycoprotein [Source:HGNC Symbol;Acc:19702] zzz999 1855 DVL1 dishevelled, dsh homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3084] zzz999 2186 BPTF bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:3581] P T 22823 MTF2 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:29535] zzz999 54477 PLEKHA5 pleckstrin homology domain containing, family A member 5 [Source:HGNC Symbol;Acc:30036] P T 7317 UBA1 ubiquitin-like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:12469] zzz999 10658 CELF1 CUGBP, Elav-like family member 1 [Source:HGNC Symbol;Acc:2549] P T 11325 DDX42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Source:HGNC Symbol;Acc:18676] P T 23118 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 [Source:HGNC Symbol;Acc:17075] zzz999 23633 KPNA6 karyopherin alpha 6 (importin alpha 7) [Source:HGNC Symbol;Acc:6399] zzz999 9146 HGS hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:4897] zzz999 6293 VPS52 vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10518] zzz999 5886 RAD23A RAD23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:9812] zzz999 27336 HTATSF1 HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:5276] zzz999 7750 ZMYM2 zinc finger, MYM-type 2 [Source:HGNC Symbol;Acc:12989] zzz999 5810 RAD1 RAD1 homolog (S. pombe) [Source:HGNC Symbol;Acc:9806] zzz999 9284 NPIP nuclear pore complex interacting protein [Source:HGNC Symbol;Acc:7909] zzz999 5094 PCBP2 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:8648] zzz999 11338 U2AF2 U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:23156] T 29894 CPSF1 cleavage and polyadenylation specific factor 1, 160kDa [Source:HGNC Symbol;Acc:2324] T 6046 BRD2 bromodomain containing 2 [Source:HGNC Symbol;Acc:1103] T 51631 LUC7L2 LUC7-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:21608] P T 26151 NAT9 N-acetyltransferase 9 (GCN5-related, putative) [Source:HGNC Symbol;Acc:23133] zzz999 23677 SH3BP4 SH3-domain binding protein 4 [Source:HGNC Symbol;Acc:10826] zzz999 6526 SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 [Source:HGNC Symbol;Acc:11038] P T 7248 TSC1 tuberous sclerosis 1 [Source:HGNC Symbol;Acc:12362] P T 84220 RGPD6 RANBP2-like and GRIP domain containing 6 [Source:HGNC Symbol;Acc:32419] zzz999 6613 SUMO2 SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:11125] P T 10226 PLIN3 perilipin 3 [Source:HGNC Symbol;Acc:16893] zzz999 51109 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) [Source:HGNC Symbol;Acc:17964] zzz999 29123 ANKRD11 ankyrin repeat domain 11 [Source:HGNC Symbol;Acc:21316] P T 79829 NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25845] zzz999 23042 PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:28995] P T 473 RERE arginine-glutamic acid dipeptide (RE) repeats [Source:HGNC Symbol;Acc:9965] T 22889 KIAA0907 KIAA0907 [Source:HGNC Symbol;Acc:29145] zzz999 7766 ZNF223 zinc finger protein 223 [Source:HGNC Symbol;Acc:13016] T 9013 TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa [Source:HGNC Symbol;Acc:11534] zzz999 5930 RBBP6 retinoblastoma binding protein 6 [Source:HGNC Symbol;Acc:9889] P T 23192 ATG4B ATG4 autophagy related 4 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:20790] zzz999 6421 SFPQ splicing factor proline/glutamine-rich [Source:HGNC Symbol;Acc:10774] zzz999 51747 LUC7L3 LUC7-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:24309] P T 10994 ILVBL ilvB (bacterial acetolactate synthase)-like [Source:HGNC Symbol;Acc:6041] zzz999 1778 DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 [Source:HGNC Symbol;Acc:2961] zzz999 134728 IRAK1BP1 interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:HGNC Symbol;Acc:17368] zzz999 28511 NKIRAS2 NFKB inhibitor interacting Ras-like 2 [Source:HGNC Symbol;Acc:17898] zzz999 4144 MAT2A methionine adenosyltransferase II, alpha [Source:HGNC Symbol;Acc:6904] zzz999 8924 HERC2 hect domain and RLD 2 [Source:HGNC Symbol;Acc:4868] zzz999 5310 PKD1 polycystic kidney disease 1 (autosomal dominant) [Source:HGNC Symbol;Acc:9008] zzz999 27332 ZNF638 zinc finger protein 638 [Source:HGNC Symbol;Acc:17894] zzz999 1488 CTBP2 C-terminal binding protein 2 [Source:HGNC Symbol;Acc:2495] P T 55120 FANCL Fanconi anemia, complementation group L [Source:HGNC Symbol;Acc:20748] zzz999 9578 CDC42BPB CDC42 binding protein kinase beta (DMPK-like) [Source:HGNC Symbol;Acc:1738] zzz999 5297 PI4KA phosphatidylinositol 4-kinase, catalytic, alpha [Source:HGNC Symbol;Acc:8983] zzz999 9538 EI24 etoposide induced 2.4 mRNA [Source:HGNC Symbol;Acc:13276] zzz999 51592 TRIM33 tripartite motif containing 33 [Source:HGNC Symbol;Acc:16290] P T 84859 LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:HGNC Symbol;Acc:28637] zzz999 56339 METTL3 methyltransferase like 3 [Source:HGNC Symbol;Acc:17563] zzz999 9931 HELZ helicase with zinc finger [Source:HGNC Symbol;Acc:16878] P T 80025 PANK2 pantothenate kinase 2 [Source:HGNC Symbol;Acc:15894] zzz999 6830 SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:11470] zzz999

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